Protein Information

Protein ZmOrphan301
ZmOrphan301 is a protein in the Orphans family.
Information
Orphans Name:	ZmOrphan301
Species:	Maize
Orphans Family:	Orphans
Gene Name(Synonym):
Uniprot ID:	K7TSD8

Overview of domains present in v5 transcripts
	PF00612	PF02179
Zm00001eb170080_T001

Gene ID	Type	Sequence	FIMO	Position
Zm00001d049244	DAPseq	sequence	fimo	position
Zm00001d049244	DAPseq	sequence	fimo	position
Zm00001d049244	ChIPseq	sequence	fimo	position
Zm00001d049244	PChIPseq	sequence	fimo	position

Zm00001eb170080_T001 from maize genome v5

Amino Acid Sequence
Copy to clipboard
Color Coding: None Secondary Structure Domain

MASRRFFYDDPYDYYYTSPYHYAYPYYRYQHPAPSRGVGGFFPAAAEAAPEAVKVDPRPRVESSRSVSVPVRFVGSDPEP
VRGAARMPQAAVLRKRAPSSEAAAIRLQAAARGFMARKSVRAVREVEREAAEVGEKVAREAEALRGDARARIAVGETLMK
MLLRLDAVRGAREYRKRVTKRVLALQDAVDALEPKPAPDSEVVAEENESEVTSEMVDDSAEATEMPVAAEHSGGVGVNAA
AETVADMEVDGGKADSEAVPEAVKESENKQDDGHINGDQTEVSNEGEWEMVADEAEPTTAATGSTEAPPQTPMTSEVMRP
TGEAGAADSALDTRKVMEMVAALCEQNAQQCAVIGALAERVDALERAVRRVEDAERRRRRGKKLKKDGKGSNRCYTD

Secondary Structure Color Code
BEND	region with high backbone curvature without specific hydrogen bonding
HELX_LH_PP_P	left-handed polyproline helix
HELX_RH_3T_P	right-handed 3-10 helix
HELX_RH_AL_P	right-handed alpha helix
HELX_RH_PI_P	right-handed pi helix
STRN	beta strand
TURN_TY1_P	type I turn
UNDETERMINED	no data available

Domains Present
PF00612
PF02179
PF02179
Hover here to show all domains

Nucleotide Sequence
Copy to clipboard

Expand

CAAAACTCGTCCCAGTGCTCAAGCA...

GRMZM2G097135_T01 from maize genome v3

Related TFome: pUT5980

Amino Acid Sequence
Copy to clipboard

MASRRFFYDDPYDYYYTSPYHYAYPYYRYQHPAPSRGVGGFFPAAAEAAPEAVKVDPRPRVESSRSVSVPVRFVGSDPEP
VRGAARMPQAAVLRKRAPSSEAAAIRLQAAARGFMARKSVRAVREVEREAAEVGEKVAREAEALRGDARARIAVGETLMK
MLLRLDAVRGAREYRKRVTKRVLALQDAVDALEPKPAPDSEVVAEENESEVTSEMVDDSAEATEMPVAAEHSGGVGVNAA
AETVADMEVDGGKADSEAVPEAVKESENKQDDGHINGDQTEVSNEGEWEMVADEAEPTTAATGSTEAPPQTPMTSEVMRP
TGEAGAADSALDTRKVMEMVAALCEQNAQQCAVIGALAERVDALERAVRRVEDAERRRRRGKKLKKDGKGSNRCYTD

Nucleotide Sequence
Copy to clipboard

Expand

CAAAACTCGTCCCAGTGCTCAAGCA...

Zm00001d049244_T001 from maize genome v4

Amino Acid Sequence
Copy to clipboard

MASRRFFYDDPYDYYYTSPYHYAYPYYRYQHPAPSRGVGGFFPAAAEAAPEAVKVDPRPRVESSRSVSVPVRFVGSDPEP
VRGAARMPQAAVLRKRAPSSEAAAIRLQAAARGFMARKSVRAVREVEREAAEVGEKVAREAEALRGDARARIAVGETLMK
MLLRLDAVRGAREYRKRVTKRVLALQDAVDALEPKPAPDSEVVAEENESEVTSEMVDDSAEATEMPVAAEHSGGVGVNAA
AETVADMEVDGGKADSEAVPEAVKESENKQDDGHINGDQTEVSNEGEWEMVADEAEPTTAATGSTEAPPQTPMTSEVMRP
TGEAGAADSALDTRKVMEMVAALCEQNAQQCAVIGALAERVDALERAVRRVEDAERRRRRGKKLKKDGKGSNRCYTD

Nucleotide Sequence
Copy to clipboard

Expand

ATGGCGTCTCGCCGTTTCTTCTACG...

Learn About Grassius

Species

Databases

Tools

Help

Protein ZmOrphan301

Protein-DNA Interactions

Meme Logos for Maize v4 Gene IDs

Interactions where ZmOrphan301 is the regulator

Interactions where ZmOrphan301 is the target
Expand

Zm00001eb170080_T001 from maize genome v5

Amino Acid Sequence
Copy to clipboard
Color Coding: None Secondary Structure Domain

Nucleotide Sequence
Copy to clipboard

Expand

GRMZM2G097135_T01 from maize genome v3

Amino Acid Sequence
Copy to clipboard

Nucleotide Sequence
Copy to clipboard

Expand

Zm00001d049244_T001 from maize genome v4

Amino Acid Sequence
Copy to clipboard

Nucleotide Sequence
Copy to clipboard

Expand

About Grassius

Access Data

Tools

Help